Pairwise Alignments

Query, 321 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 319 a.a., ribose ABC transporter, periplasmic ribose-binding subunit from Pseudomonas putida KT2440

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 11/265 (4%)

Query: 9   GLLLSTA---TLVLAQPLGTAQAQEKRIVAVSIPAATHGWTGGVVYHAEQAEKEVEAAFP 65
           G LL+ A   +L LA PL  A A++K  VA+ + +  + +   +   A+  +K     F 
Sbjct: 7   GRLLALAVISSLSLALPLSAAHAEDKPKVALVMKSLANEFFRTMEDGAKDYQKTHADEFE 66

Query: 66  NVDVVLSTASSATAQVSALEDLSATRKLDALVILPFTSEELTGPVEQIKKNGTFISVVDR 125
            +   +   +    Q+  +E +       ALVI P  S+ L   V++    G  +  +D 
Sbjct: 67  LIANGIKNETDTGEQIRIVEQM-VNAGAKALVIAPADSKALVSAVKKAMDQGVVVINIDN 125

Query: 126 GLTDPTIQDL-----YVAGDNIAVGANTARWL-SDKLGGQGEIVVLRGIPTVID-DERIK 178
            L    ++       +V  DN         +L S KL    ++ ++ G+ T  +  +R  
Sbjct: 126 RLDPDLLKSKGISVPFVGPDNRKGARLVGDYLASQKLKAGDQVGIIEGVSTTTNAQQRTA 185

Query: 179 GFSDVIDKTNIKILDIQYANWNQDEAFKLMQDYLAKYPKIDAVWANDDDMLLGVIEAVDR 238
           GF D +D   +KI+ +Q  NW  D+   +    L +YP + A+ A +D M LG + AV  
Sbjct: 186 GFKDAMDAAQMKIVSVQSGNWEIDKGNAVAASMLNEYPDLKALLAGNDSMALGAVSAVRA 245

Query: 239 AGRKDIKYALGGNGMKQVIEMVKEG 263
           AG+      +G + +  +  M+++G
Sbjct: 246 AGKTGQVQVVGYDNINAIKPMLEDG 270