Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (436), Expect = 1e-47
 Identities = 115/309 (37%), Positives = 164/309 (53%), Gaps = 22/309 (7%)

Query: 24  PFIALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSVGSMMA 83
           PF+ L V+ L   L +  F++++NL N+  + +  AIIAVG T VI +GG+DLSVG +MA
Sbjct: 34  PFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMA 93

Query: 84  F----VTGIMIMAMNHLAPAFGAWAIPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVTL 139
                  G+M+     L P        +  G  +L+G   G+ NGL V    + P IVTL
Sbjct: 94  LSGTLTAGLMVAG---LPPG-------LAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTL 143

Query: 140 GTMGIFRAFITFMTDGGSLPIDRSLREAYRPVYFG--SFFGIPYPVLITFVVVMAGAFLL 197
            TMGI R      TDG   PI   L + +   +FG  S FGI  P+LI  +  +    LL
Sbjct: 144 ATMGIARGLGLMYTDG--YPIS-GLPDWF--AFFGRESLFGIQVPILIMLLTYLVAYVLL 198

Query: 198 YKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGAATPTTG 257
             T+ GR + + G N E  R SGV  A  +   Y I G   A+A +    RL +  P  G
Sbjct: 199 QHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAG 258

Query: 258 QLWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEYLVAAVQGAI 317
             +EL  I AVV+GG  + GGRG I GT+ GA++L V+ N + +   VS Y+ + ++G I
Sbjct: 259 VSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLG-VSPYVQSVIKGGI 317

Query: 318 IIIAMLAHR 326
           I++A+   R
Sbjct: 318 ILLAIFISR 326