Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

 Score =  142 bits (357), Expect = 2e-38
 Identities = 114/340 (33%), Positives = 163/340 (47%), Gaps = 34/340 (10%)

Query: 10  PTNEGARIRWADLAPFIALA----VIVLFGALVNPN--FVSSANLINVITRSAFIAIIAV 63
           PT    R+   +L+ F+ L     V  LFG +V      ++S  L+ +I + + I ++A+
Sbjct: 13  PTKSRRRLP-TELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAI 71

Query: 64  GATFVISSGGLDLSVGSMMAFVTGIMIMAMNHLAPAFGAWAIP------------MGAGV 111
           G T VI + G+DLS GS++A     MI A       F     P            MG GV
Sbjct: 72  GVTQVIITTGIDLSSGSVLAL--SAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGV 129

Query: 112 ALLVGALCGLFNGLIVTVGRIEPFIVTLGTMGIFRAFITFMTDGGSLPIDRSLREAYRPV 171
            LL GA+    NG I+ V  I PFI TLG M   R    + T+G  + +   L ++Y  +
Sbjct: 130 GLLAGAI----NGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSM---LSDSYTAI 182

Query: 172 YFGSFFGIPYPVLITFVVVMAGAFLLYKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAY 231
             G+      PV+I  VV +     L  TKYG+   + G N++ AR SG+NV       Y
Sbjct: 183 GHGAM-----PVIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVY 237

Query: 232 VIQGFCVAVAAICYVPRLGAATPTTGQLWELQVITAVVIGGTLLRGGRGRIGGTVAGALI 291
            I G    +A +    R        G  +EL  I A VIGGT L GG GRI GTV GALI
Sbjct: 238 SIAGLLAGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALI 297

Query: 292 LEVIANVMVLSDLVSEYLVAAVQGAIIIIAMLAHRFTANR 331
           L V+A+       V  Y+   ++G II++A++  ++   R
Sbjct: 298 LGVMASGFTFVG-VDAYIQDIIKGLIIVVAVVIDQYRNKR 336