Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  148 bits (374), Expect = 2e-40
 Identities = 106/324 (32%), Positives = 162/324 (50%), Gaps = 30/324 (9%)

Query: 17  IRWADLAPFIALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDL 76
           I W  L P++AL    +F A  +  F++  NL  ++ +   + +IA+G T +I + G+DL
Sbjct: 9   IPWGALGPWLALLGACIFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDL 68

Query: 77  SVGSMMAFVTGIMIMAMNHLAPAFGAWAIPMGAGVALLVG----ALCGLFNGLIVTVGRI 132
           S G         M+MA+  +  +  A  + + A VA+L G     L GL NGL+VT  ++
Sbjct: 69  SCG---------MVMALGGIIMSKFATELGLPAPVAILCGIGVTTLFGLLNGLLVTRIKL 119

Query: 133 EPFIVTLGTMGIFRAFITF------MTD--GGSLPIDRSLREAYRPVYFGSFFGIPYPVL 184
            PFIVTLGT+ I  A          +TD  GG   +  +       V +G+        +
Sbjct: 120 PPFIVTLGTLNIAFAITQLYSSSQTITDLPGGLTGLGTTFSIGNAEVAWGA--------V 171

Query: 185 ITFVVVMAGAFLLYKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAIC 244
           +  V+     F+L +T  GR + + G+N E  R  G+    V  G YV  G    +A++ 
Sbjct: 172 LMLVLYGLAWFVLRETAAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLL 231

Query: 245 YVPRLGAATPTTGQLWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDL 304
            V R G   P  GQ   L  ITAVV+GGT L GGRG + G++ G LI+ V  N + L  +
Sbjct: 232 SVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGV 291

Query: 305 VSEYLVAAVQGAIIIIAMLAHRFT 328
            S Y V  V G ++I+A+ A + +
Sbjct: 292 SSIYQV-LVTGVLVILAVTADQLS 314