Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  171 bits (434), Expect = 2e-47
 Identities = 112/303 (36%), Positives = 166/303 (54%), Gaps = 16/303 (5%)

Query: 26  IALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSVGSMMAFV 85
           IAL V++   + ++PNF +  NL N++ +++  AI+AVG T VI + G+DLSVGS++A  
Sbjct: 24  IALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 83

Query: 86  TGIMIMAMNHLAPAFGAWAIPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVTLGTMGIF 145
             +    +     A  A A       AL +GA  G   G+IV  GR++ FI TL  M + 
Sbjct: 84  GAVAASIVGVEVNALVAVA------AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLL 137

Query: 146 RAFITFMTDGGSLPIDRSLREAYRPVYFGSF-----FGIPYPVLITFVVVMAGAFLLYKT 200
           R      TDG   P++    +      FG F      G+P PV I  +V +A  ++L+ T
Sbjct: 138 RGVTMVYTDGS--PVNTGFTD--NADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHT 193

Query: 201 KYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGAATPTTGQLW 260
           + GR + + G N    R SG++V+ V+   Y + G   ++A I  V RL +A PT G  +
Sbjct: 194 RLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAGTGY 253

Query: 261 ELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEYLVAAVQGAIIII 320
           EL  I AVV+GGT L GG+GRI GT+ GALIL  + N + L   VS Y    V+  +I++
Sbjct: 254 ELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLG-VSSYYQMIVKAVVILL 312

Query: 321 AML 323
           A+L
Sbjct: 313 AVL 315