Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 328 a.a., fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) from Escherichia coli BW25113

 Score =  159 bits (401), Expect = 1e-43
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 10/309 (3%)

Query: 19  WADLAPFIALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSV 78
           W      +  AV+ +  A+  PNF +  N+  +    +   ++A G  F ++SG  DLSV
Sbjct: 22  WDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSV 81

Query: 79  GSMMAFVTGIMIMAMNHLAPAFGAWAIPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVT 138
            S++A   G+    + +L  +   W   +G    LL+G LCGL NG ++   +I   I T
Sbjct: 82  ASVIA-CAGVTTAVVINLTESL--W---IGVAAGLLLGVLCGLVNGFVIAKLKINALITT 135

Query: 139 LGTMGIFRAFITFMTDGGSLPIDRSLREAYRPVYFGSFFGIPYPVLITFVVVMAGAFLLY 198
           L TM I R     ++DG ++ I+    E++  + + ++FG+P P+ +T   ++    LL 
Sbjct: 136 LATMQIVRGLAYIISDGKAVGIED---ESFFALGYANWFGLPAPIWLTVACLIIFGLLLN 192

Query: 199 KTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGAATPTTGQ 258
           KT +GR   + G N E AR +GV V   +   +V+ G   A+A I    R+ +  P T  
Sbjct: 193 KTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSI 252

Query: 259 LWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEYLVAAVQGAII 318
            +EL VI+A V+GG  L+GG G+I   VAG LIL  + N M L + +S +    V+G I+
Sbjct: 253 GYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLN-ISPFAQYVVRGLIL 311

Query: 319 IIAMLAHRF 327
           + A++  R+
Sbjct: 312 LAAVIFDRY 320