Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 393 a.a., D-xylose transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  141 bits (355), Expect = 3e-38
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 59/380 (15%)

Query: 10  PTNEG-ARIRWADLAPFIALAVIV----LFGALVNPNFVSSANLINVITRSAFIAIIAVG 64
           PT+ G + ++  +L  F+ +A I+     F    +  ++S+ N+ N++ ++A   I+AVG
Sbjct: 14  PTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVG 73

Query: 65  ATFVISSGGLDLSVGSMMAFVTG-----------------IMIMAMNHLAPAFGAWAIPM 107
             FVI S  +DLSVGSMM  + G                 I+ + +  L  A+  W +  
Sbjct: 74  MVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAY 133

Query: 108 G---------AGVALLVGALCGLFNGLIVT--------VGRI-----EPFIV-TLGTMGI 144
                     AG+    G L G+ NG  V+        +G+        FI+  LG M  
Sbjct: 134 RKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAF 193

Query: 145 ----FRAFITFMTDGGSLPIDRSL--REAYRPVY-------FGSFFGIPYPVLITFVVVM 191
               +R  +     G   P   ++  R+A   +           + G+P PVL+  ++++
Sbjct: 194 VGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLL 253

Query: 192 AGAFLLYKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGA 251
            G F+  +T +GRR+ + G N+E AR SG+NV   +   + I G  VA+A +    RLGA
Sbjct: 254 GGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGA 313

Query: 252 ATPTTGQLWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEYLVA 311
            +P+ G + EL  I A VIGGT L GG G + G V GA I+  + N M + D V  +   
Sbjct: 314 GSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMD-VPTFWQY 372

Query: 312 AVQGAIIIIAMLAHRFTANR 331
            V+GAI+++A+     T  R
Sbjct: 373 IVKGAILLLAVWMDSATKRR 392