Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  169 bits (429), Expect = 6e-47
 Identities = 117/315 (37%), Positives = 169/315 (53%), Gaps = 21/315 (6%)

Query: 20  ADLAPFIALAVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSVG 79
           A     IAL ++ L  +L++  F++ AN  NV+ + +    I+VG T VI + G+DLSVG
Sbjct: 5   AKFQSLIALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVG 64

Query: 80  SMMAFV---------TGIMIMAMN-HLAPA-FGAWAIPMGAGVALLVGALCGLFNGLIVT 128
           S++A            GI +  +N H+  A  GA  + +G G  L      G FNG  +T
Sbjct: 65  SILALCGAVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGL------GWFNGWTIT 118

Query: 129 VGRIEPFIVTLGTMGIFRAFITFMTDGGSLPIDRSLREAYRPVYFGSFFGIPYPVLITFV 188
             ++ PF+ TL  + I R      T  G  PI+  L E +  +  G F GIP PV IT V
Sbjct: 119 RFKVPPFVATLAMLTIARGLTMLWT--GGFPIN-GLGEDFAFLGTGWFLGIPMPVWITAV 175

Query: 189 VVMAGAFLLYKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPR 248
           +V     L  KTK+GR + + G N   AR SG+N++ V+   Y I G   AV  +    R
Sbjct: 176 IVALAVLLTKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSR 235

Query: 249 LGAATPTTGQLWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEY 308
           L +A P  G  +EL  I AVVIGGT L GG+G I G V G +I+ V+ N +VL + VS +
Sbjct: 236 LDSAQPNAGISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLN-VSPF 294

Query: 309 LVAAVQGAIIIIAML 323
               V+GA+I++A++
Sbjct: 295 WQQVVKGAVILLAVV 309