Pairwise Alignments

Query, 331 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  169 bits (427), Expect = 1e-46
 Identities = 106/307 (34%), Positives = 167/307 (54%), Gaps = 20/307 (6%)

Query: 29  AVIVLFGALVNPNFVSSANLINVITRSAFIAIIAVGATFVISSGGLDLSVGSMMAFVTGI 88
           A++ +F A  N  F  + N + +  +   IA++ +GAT VI +GG+DLSVGS++A    +
Sbjct: 32  ALVAVFSATSNAFFTVN-NGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLALAGVV 90

Query: 89  MIMAMNHLAPAFGAWAIPMGAGVALLVGALCGLFNGLIVTVGRIEPFIVTLGTMGIFRAF 148
             +A+  L        +P+G  + +L G+LCGL NGL+VT  ++ PFI TLG M I R  
Sbjct: 91  AALAVKELG-----MPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGV 145

Query: 149 ITFMTDGGSLP-IDRSLREA-----YRPVYFGS-------FFGIPYPVLITFVVVMAGAF 195
              +T   ++  +  S  E      +R V  G        F GIPYPV++  V+ +A +F
Sbjct: 146 ALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSF 205

Query: 196 LLYKTKYGRRLKSAGSNVEVARFSGVNVAGVRTGAYVIQGFCVAVAAICYVPRLGAATPT 255
           +L ++  GR + + GSN + AR SGVNVA V    Y++ G    +     + RL  A P 
Sbjct: 206 MLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQPN 265

Query: 256 TGQLWELQVITAVVIGGTLLRGGRGRIGGTVAGALILEVIANVMVLSDLVSEYLVAAVQG 315
            G ++EL  I + VIGGT L GG G I GT  GA ++ ++ N + ++  VS +    + G
Sbjct: 266 EGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNG-VSAFTQQIIIG 324

Query: 316 AIIIIAM 322
            +I++ +
Sbjct: 325 LVILVTV 331