Pairwise Alignments

Query, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  173 bits (438), Expect = 6e-48
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 4/274 (1%)

Query: 53  LDQKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLF 112
           ++QKS G+LK+        G D +    +R G       S      ++P + +  LPFLF
Sbjct: 47  VEQKSEGRLKIDVGGSAQFGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLF 106

Query: 113 ANAQEAYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRV 172
            + ++A  V+DG  GD +    E  GLV LA+W NG R  SNS R +T   D  GMK+R 
Sbjct: 107 QDLKQAEAVMDGPVGDKIAAAAEQQGLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRT 166

Query: 173 MQNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETN 232
             + + +D F  LGA+ TPMAF E++ AL+   +D QENP + I +SK  EVQ Y++ TN
Sbjct: 167 PPDQMTVDIFTALGASPTPMAFSELYIALQQGVVDGQENPLINIHSSKLHEVQPYISMTN 226

Query: 233 HAYTPFLFLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVN 292
           H Y    FL SK +FD+  PE+Q  +R+ A       R+++ +   +   +++ AG+++N
Sbjct: 227 HKYESTPFLASKIVFDALLPEDQQIIRDAAREAGQLNRQMVGEQTTRLRGELEAAGVKIN 286

Query: 293 TLSAEEQARIREKSMVVYEKHKAEIGAEVVDAIL 326
            +   + A   + +  VY+K +A+   ++VD ++
Sbjct: 287 DV---DPAPFVQATQSVYDKWRAQY-PDLVDELV 316