Pairwise Alignments

Query, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

Subject, 324 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  110 bits (274), Expect = 6e-29
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 5/254 (1%)

Query: 55  QKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFAN 114
           +++ G+ K+  F    LG +    Q L+ G  + +++ SS        +GV   P++F +
Sbjct: 53  KRTEGRYKIDVFPASQLGKEADINQGLKLGTVDIIISGSSFAARDHAPIGVTYFPYIFRD 112

Query: 115 AQE--AYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRV 172
                AYT  D  F  +     EA+G    A    G R+ +++ RP+ K  D +G+K+RV
Sbjct: 113 PAHMIAYTKSDV-FKRLAAGYEEASGNHITAVTYYGTRHTTSN-RPIAKCADMQGLKMRV 170

Query: 173 MQNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETN 232
                +L   +  GAN TP+AF EV+ AL+   ++AQENP  TI+  KFFEVQK++  T 
Sbjct: 171 PDVPAYLAMPRACGANTTPIAFAEVYLALQNGTVEAQENPLTTIEAKKFFEVQKHIVLTG 230

Query: 233 HAYTPFLFLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVN 292
           H       + SK ++   +  ++    E          K+I++  K+ +   KE G+EV 
Sbjct: 231 HIVDHLNTVVSKNLWSQLSDADKQIFTEVMQEAAVRATKIIEEREKELVATFKERGIEVT 290

Query: 293 TLS-AEEQARIREK 305
            +  A+ +  + EK
Sbjct: 291 EVDRADFEKTVNEK 304