Pairwise Alignments

Query, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 13/258 (5%)

Query: 57  SGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQ 116
           +GG++ +T +    LGG  +    +R G         + L  ++P + VF+ PF++ +  
Sbjct: 56  TGGEVTVTVYPASQLGGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGA 115

Query: 117 EAYTVLDGDFGDMM---NEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVM 173
            A    D      +   NEKL A G+  +     G R++S++  PV    D  G   R +
Sbjct: 116 HALAATDPQSSPALQAINEKLIAQGVRIVGRIYRGDRHISSNF-PVKTPADLAGKPFRAV 174

Query: 174 QNNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNH 233
              +++   +  GA  TP+   E+ +AL T  +  QENP   I ++   EVQ +++ T H
Sbjct: 175 PLELWVSMVKGFGAIPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEVQSHLSMTGH 234

Query: 234 AYTPFLFLFSKPIFDSYTPEEQAAL--------RECAVVGRDEERKVIQDLNKKSLEKIK 285
                    ++ ++   + E++ AL        ++   +  + E  ++++L  + +  I 
Sbjct: 235 MRAVLAVFINEEVWQGLSEEQRTALTKVLDEEAQKSLKMATESEADLVKELKGRGMTVIT 294

Query: 286 EA-GLEVNTLSAEEQARI 302
           EA GL+V     +  A+I
Sbjct: 295 EAEGLDVAAFREKVGAQI 312