Pairwise Alignments

Query, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 3/303 (0%)

Query: 2   RKLLLATTAIAFGLSAAAPAFAEFND-RNIRVSNGINEDHPVGNGIKAMQACLDQKSGGK 60
           R+  L   A    LS A P+     + R +R+       HP  N    +   L  ++ G+
Sbjct: 5   RRTFLGGVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGR 64

Query: 61  LKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFANAQEAYT 120
           L ++ F  G LG +    Q ++SG  +     ++ L   IPA+   + P++  +  +   
Sbjct: 65  LSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAK 124

Query: 121 VLDGDFGDMMNEKLEA-AGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNIFL 179
           ++       + + L A  G V LA W      +  S + +   +D  GMK+R+     + 
Sbjct: 125 LVREPVAMKLLDVLPAETGTVGLA-WGITTMRVVFSAKEIAGLDDINGMKLRINTTPAYR 183

Query: 180 DTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHAYTPFL 239
           D +Q LGA  TP+    VF A+    +D  E         +F +V K + + N  + P +
Sbjct: 184 DFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIFMPCV 243

Query: 240 FLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVNTLSAEEQ 299
            L S  ++ +    ++  +        DE+           LEK   AG+ +  ++  + 
Sbjct: 244 ALASGRVWQTLPEADREIIARLTKSALDEQIDATVANEPALLEKFAGAGIPIKDVTVADA 303

Query: 300 ARI 302
            RI
Sbjct: 304 GRI 306