Pairwise Alignments

Query, 177 a.a., TRAP-type small permease component from Sinorhizobium meliloti 1021

Subject, 201 a.a., TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 13/182 (7%)

Query: 3   KAIDTFYKLLELLLIVLLAGMAVMVFLNVVLRYGFNSGINVSDEMSRYFFVWLTFIGAVV 62
           +AID     +    I L+ G  V+   N ++RY FN+  N   E+  Y F W   I A  
Sbjct: 9   RAIDRLNAWVGRYAIWLIMGSTVISAANALVRYTFNTSSNAFLEIQWYLFAWSFLIAAGF 68

Query: 63  TFRENSHVGVETLVSLFGRKGRIICMILS---NIVVIAVSAIFFWGTWKQSPINASMAAP 119
           T     HV ++ L S   +K ++   IL     +  + +  +++          +   + 
Sbjct: 69  TLLNREHVRIDVLNSRLPKKAQMWIDILGFAFFLTPVCLLVLYYGIPMLMEKYASGEMSG 128

Query: 120 VTGISMLWVYGIGYFTGAGVVLIALE------RLVRLLTGRVTEEEIAAFAGENMTLEQL 173
             G  + W   +     AG +L+ L+      + V  +TG   +  I   AGE    E+L
Sbjct: 129 NPGGLIRWPVWLA--IPAGFILLMLQGWSELIKRVAFITGHGPDPTIK--AGEKSAEEEL 184

Query: 174 AE 175
           AE
Sbjct: 185 AE 186