Pairwise Alignments

Query, 398 a.a., 2-dehydro-3-deoxy-D-arabinonate dehydratase, 2,4-dioxopentanoate forming (from data) from Sinorhizobium meliloti 1021

Subject, 405 a.a., putative 2-keto-3-deoxyxylonate dehydratase from Pseudomonas putida KT2440

 Score =  421 bits (1082), Expect = e-122
 Identities = 227/373 (60%), Positives = 270/373 (72%), Gaps = 9/373 (2%)

Query: 29  VGRVWSKTAGGPCPVLISEGEVFDLTPLAATISALLEIDGLVDALRDPSRFASLGSLDAF 88
           VGRVW    G P  VL+  G V+D++   AT+SALLE+D  V  LR       L +L A 
Sbjct: 26  VGRVWLPEQG-PAVVLVKAGAVYDISTHVATVSALLEVDDPVAYLRALPLAEPLIALPAL 84

Query: 89  LRGEAGD--------LLAPADLQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLA 140
           L              LLAP DLQAVKAAGVTFA S+LERV+EEQAKGDP +A  IR  LA
Sbjct: 85  LGNSDPTRRTPHQPWLLAPIDLQAVKAAGVTFATSLLERVVEEQAKGDPAKADAIRDTLA 144

Query: 141 PVLGDNLKGLVAGSDKAAEVKKLLQELGLWSQYLEVGIGPDAEIFTKAQPMSSVGCGAYI 200
             +G +L  +V GS +A  ++K+L E GLWSQYLEVGIGPDAE+FTKAQP+S+VG GA I
Sbjct: 145 SRIGADLSQIVPGSAQAEALRKVLVEQGLWSQYLEVGIGPDAEVFTKAQPLSAVGHGADI 204

Query: 201 GIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFEGRSALLLSKAKDNNASCSIG 260
           GIHPKS WNNPEPEVVLAV+S G I GA LGNDVNLRDFEGRSALLLSKAKDNNAS ++G
Sbjct: 205 GIHPKSSWNNPEPEVVLAVSSNGSIKGAMLGNDVNLRDFEGRSALLLSKAKDNNASTALG 264

Query: 261 PFIRLFDGAFTIEDVKQAEVSLVVDGKEGFKMTGISPMSAISRSPEDLVSQLLNDNHQYP 320
           P +RLFD +F ++DV+ AEV L V+G++GF ++G S M  ISR P+DLV Q LN+NHQYP
Sbjct: 265 PLLRLFDESFGLDDVRAAEVDLRVEGEDGFILSGRSSMRQISRDPQDLVQQTLNENHQYP 324

Query: 321 DGVVFFLGTMFAPVKDRRGTGLGFTHEIGDRVEISTPRLGRLVNWVDHSDRCPKWSFGLG 380
           DG+V FLGT+FAP +DR   G GFTH+ GD V IS P+LG L N V  SD  P+W FGL 
Sbjct: 325 DGLVLFLGTLFAPKQDRDQPGNGFTHKPGDVVSISNPQLGTLCNRVTTSDLAPQWDFGLR 384

Query: 381 ALMKNLAERGLLQ 393
           AL+ NL  RGLL+
Sbjct: 385 ALIDNLGRRGLLE 397