Pairwise Alignments

Query, 490 a.a., Permease, MFS from Sinorhizobium meliloti 1021

Subject, 510 a.a., Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system from Variovorax sp. SCN45

 Score =  122 bits (306), Expect = 3e-32
 Identities = 101/406 (24%), Positives = 177/406 (43%), Gaps = 5/406 (1%)

Query: 21  IAILPLVLLVAMDGSILYLAMPHVTSALMPTADQALWILDIYGFVVGSLLIAFGNIGDRY 80
           I+I+   ++ A+D +I  +A+PH+  +L  + DQ  W+L  Y       L   G +   +
Sbjct: 17  ISIMLATIMQALDTTIANVALPHMQGSLQASQDQITWVLTSYIVASAIALPLTGWLCGHW 76

Query: 81  GRLKLIITGAAVFGAGSLGAAYSQTPEQLIASRALMGLGGATLLPSGLAIVSALFPDPRL 140
           GR ++ I     F   S     + +   ++A+R L G+ GA L+P   A++  + P  ++
Sbjct: 77  GRRRVFIISVIGFTVASALCGLATSLVGIVAARLLQGIFGAALVPLSQAVLLDINPREKV 136

Query: 141 RAQAIGIFAATFAAGFAIGPLIGGMLLRQFAWGAVFLINVPVVIGFMIGAPILLREVRST 200
             QA+ I+ A    G  +GPL+GG L   F W  VF IN+PV I    G    L E R  
Sbjct: 137 -GQAMAIWGAGIMVGPILGPLLGGWLTENFDWRWVFFINLPVGIFAFWGIARYLPESRPQ 195

Query: 201 VGGSIDLASLV-LSFAGILLFTYSLKNAAAYGFTPTQI-VAGAAGIFALALF-ARRQTKL 257
            G  +D+   V LS A  +L  +  +      F   +I +  AA + A   F     T  
Sbjct: 196 -GEKLDIFGFVTLSLAIGMLQLFLDRGEQLDWFDSWEIKLEAAAALVAFGFFVVHTWTVQ 254

Query: 258 EYPLLDLGLFRDRIFSIAILTGLLSLVVWSAAGYLSGVYLQSVLGIDVFAAALLTLPGAI 317
                D  L +DR F   +L   +  ++  A   L   +LQ ++G  V     +T P  +
Sbjct: 255 GVSFFDRDLLKDRNFVTGLLFAFIVGMILFATMALLPNFLQGLMGYPVVYTGQVTAPRGV 314

Query: 318 VLTATCVATARIVERIGRKTALVATHLLIGAGVFLLLFTTTETGIAVFIASTMIAGIGYG 377
                 +   R+V+++  +  +     L    ++ +   T +    + I S  I G+G G
Sbjct: 315 GTMIAMIIVGRLVQKVDVRAIMAVGFGLTAFSLYQMTRLTLQMDSTLIIVSGFIQGLGIG 374

Query: 378 LSFSLVADIAVSAVPANRAGAAGSIAETSNELGNALGISLLGSLAT 423
            +F  ++    + +          I      +G+++GIS++ +L T
Sbjct: 375 FTFVPLSTATFATLAPRLRNQGTPIFSLLRNIGSSVGISIVQALLT 420