Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 317 a.a., Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1) from Variovorax sp. SCN45

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 83/310 (26%), Positives = 133/310 (42%), Gaps = 19/310 (6%)

Query: 1   MKLTR--LRTAALAAGLATLLTSTALAADVKATMIIYLDPSVQFFNPVVKGA----QDAA 54
           MK TR  L++AA    L  ++ + A A D     ++    + +FF  +  GA    +  A
Sbjct: 1   MKFTRRTLQSAAALTLLGAIVATPAFAQDKPKVALVMKSLANEFFRTMEDGAKAHQKANA 60

Query: 55  AQFGVDLDVQYANNDPVRQNDLIESATASGVDGIAVAISSSDAFDESICAAVKAGIIVIG 114
           AQ+ +  +      D   Q  ++E   A  ++ + +A + S A    I  A+  GI+V+ 
Sbjct: 61  AQYTLVANGIKDETDTAAQIKMVEQMVAQKINALVIAPADSKALVPVIKTAIDKGILVVN 120

Query: 115 FNNDDLDGA---KGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPREIPEASFA 171
            +N  LD A   +   +  +VG D  A    +G+ + KE  LKSGD V     +     A
Sbjct: 121 IDN-QLDAAALKEKGIQVPFVGPDNRAGAKLVGDALAKE--LKSGDKVGIIEGVSTTFNA 177

Query: 172 VARGGGIEKAMTENGIKVETVRAGLDPAEAQNIIAQ-FLIANPNVKALFGTGSVTSTVGA 230
             R  G + AM   G+ V  V++G    +  N +A   L  +P++KAL       +    
Sbjct: 178 QQRTLGYQDAMKAAGVTVVGVQSGQWEIDKGNTVAAGMLREHPDLKALLAGNDSMALGAV 237

Query: 231 GAIKDAGV--DIPFGGFDLAVEIVNAVESGAMYATMDQQPYLQGYYPI----AQIALAKK 284
            A+K AG    +   G+D    I   +  G + AT DQ    Q  + I      IA  KK
Sbjct: 238 AAVKAAGKTGKVLVVGYDNIGAIKPMLADGRVLATADQFAAKQAVFGIETALKAIADKKK 297

Query: 285 YGLTPTDIDT 294
               P ++ T
Sbjct: 298 QSEMPAEVKT 307