Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 296 a.a., ribose ABC transporter substrate-binding protein RbsB from Dickeya dianthicola ME23

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 10/270 (3%)

Query: 1   MKLTRLRTAALAAGLATLLTSTALAADVKATMIIYLDPSVQFFNPVVKGAQDAAAQFGVD 60
           M L ++ T   A  L+  +++ ALA D  A ++  L+    FF  +  GAQ  A + G +
Sbjct: 1   MNLKKIATLVSAVALSAAVSANALAKDTIALVVSTLNNP--FFVSLKDGAQKEADKLGYN 58

Query: 61  LDVQYANNDPVRQNDLIESATASGVDGIAVAISSSDAFDESICAAVKAGIIVIGFNNDDL 120
           L +  + N+P ++   ++  T  G   + +  + S+A   ++  A +A I VI     D 
Sbjct: 59  LVILDSQNNPAKELSNVQDLTVRGTKLLLINPTDSNAVGNAVKLANQAKIPVITL---DR 115

Query: 121 DGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPREIPEASFAVARGGGIEK 180
             A G    ++V  D    G   G+ + K+ G   G  V     +   S A  RG G  K
Sbjct: 116 VAASGEV-ISHVASDNAFGGKVAGDFIAKKLG--EGAKVIQLEGLAGTSAARERGAGFIK 172

Query: 181 AMTENGI-KVETVRAGLDPAEAQNIIAQFLIANPNVKALFGTGSVTSTVGAGAIKDAG-V 238
           +  +N    + +  A  D  +  N++   L A+P+VKA+F      +     A++ AG  
Sbjct: 173 SAEKNKFAMLASQPADFDRTKGLNVMQNLLTAHPDVKAVFAQNDEMALGALRALQTAGRD 232

Query: 239 DIPFGGFDLAVEIVNAVESGAMYATMDQQP 268
           D+   GFD   + V AVE G + AT+ Q+P
Sbjct: 233 DVLVVGFDGTADGVKAVEGGKLAATVAQRP 262