Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 346 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 38/296 (12%)

Query: 6   LRTAALAAGLATLLTSTALAADVKATMIIYLDPSVQFFNPVVKGAQDAAAQFGV-DLDVQ 64
           +R+   AA +       A AAD     ++   P   +F    +  +DAA  FG+   D +
Sbjct: 10  MRSLVAAAIIGAGACGVAQAADQSKIALVPGGPH-PYFAAWEQAGKDAAKDFGLAGADYK 68

Query: 65  YANN-DPVRQNDLIESATASGVDGIAV-------AISSSDAFDESICAAVKAGIIVIGFN 116
                +  +QN L+ES  + G +G  +       A+S+++    +  A V AG    G  
Sbjct: 69  VPQKWELAQQNQLLESLLSQGYNGFLIFPGDPVGAVSTAEELTGN-GANVIAGA---GCF 124

Query: 117 NDDLDGA------KGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPREIPEASF 170
            D    A       GN   AY+G  EL      G + I  F   +G +V    ++     
Sbjct: 125 KDPSPAAFCLGTDTGN--SAYLGTKELIKAMGSGKKRIAHF---TGFLVDPNTQL----- 174

Query: 171 AVARGGGIEKAMTENGIKVETVRAGLD-PAEAQNIIAQFLIANPN-VKALFGTGSVTSTV 228
              R   ++KA  E G +V  V A +D P  A+  I  +L A+ + V  +  T  V + V
Sbjct: 175 ---RIDAVKKAADEAGAEVVQVIADIDAPEPAEEKINAYLAAHASEVDGIVTTAWVPAVV 231

Query: 229 GAGAIKDAGVD-IPFGGFDLAVEIVNAVESGAMYATMDQQPYLQGYYPIAQIALAK 283
            + A++  G   I   G D    ++ A++ G +  TM Q PY QGY  +   AL+K
Sbjct: 232 ASNALRKIGDKRIHMVGIDHDEVVLKAIKDGFVDGTMLQNPYGQGY--VGSFALSK 285