Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 336 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 66.6 bits (161), Expect = 8e-16
 Identities = 91/319 (28%), Positives = 134/319 (42%), Gaps = 20/319 (6%)

Query: 1   MKLTRLRTAALAAGLATL----LTSTALAADVKATMIIYLDPSVQFFNPVVKGAQDAAAQ 56
           MKLTR    ++ A  A L    L S A AADVK  +++       FF    KGAQ+AA  
Sbjct: 1   MKLTRRTLTSVLALSAALSVAGLGSIAEAADVKIALVVK-SLGNGFFEAANKGAQEAAKD 59

Query: 57  FGVDLDVQYANNDPVR---QNDLIESATASGVDGIAVAISSSDAFDESICAAVKAGIIVI 113
            G  +++ Y          Q ++I S  A GVD IA++ +  DA   ++  A + GI VI
Sbjct: 60  LG-GVEIIYTGPTSTTAEGQIEVINSLIAQGVDAIAISANDPDAVVPALKKAAQRGIKVI 118

Query: 114 GFNNDDLDGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPREIPEASFAVA 173
            +  D     +G   Q     + L     L        G K GD           +  V 
Sbjct: 119 SW--DSGVAPEGRILQLNPSSNALIGKMCLQLAAAHLEGGK-GDFAILSATTTSTNQNVW 175

Query: 174 RGGGIEKAMTENGIKVETVRAGLDPAEAQNIIAQFLIAN-PNVKALFGTGSVTSTVGAGA 232
            G   ++     G+ + T   G D A+     AQ L+++ PNVK +    +V     + A
Sbjct: 176 IGEMKKQLKDFPGLNLVTTVYGDDLADKSYREAQGLLSSQPNVKVIVAPTTVGVLAASQA 235

Query: 233 IKDAGV--DIPFGGFDLAVEIVNAVESGAMYATMDQQPYLQGYYPIAQIALAKKYGLTPT 290
           +KDAG    +   G  L  E+  A++SGA        P   G Y   QIA    Y L   
Sbjct: 236 VKDAGKIGQVFVTGLGLPSEMAGAIKSGATKEFAIWNPIDLG-YSATQIA----YRLVKG 290

Query: 291 DIDTGQGAFLDKTRIGSVK 309
           + D   G+ ++  R+G +K
Sbjct: 291 EADGKPGSEIEAGRMGKIK 309