Pairwise Alignments

Query, 316 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 15/278 (5%)

Query: 1   MKLTRLRTAALAAGLATLLTSTALAADVKATMIIYLDPSVQFFNPVVKGAQDAAAQFGVD 60
           MK +R+   +  A L  L   +A AA+VK   +   +    FFN + +  +  A   G+ 
Sbjct: 1   MKFSRILLTS--AALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIA 58

Query: 61  LDVQYANNDPVRQNDLIESATASGVDGIAVAISSSDAFDESICAAVKAGIIVIGFNNDDL 120
           +    A  D   Q + I+      +D +    + + A    +  A  AG+ VI  +  + 
Sbjct: 59  VVTVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDR-NA 117

Query: 121 DGAKGNCRQAYVGMDELASGYELGNRMIKEFGLKSGDVVFNPRE--IPEASFAVARGGGI 178
           DGA G+    ++  D +AS   + + +IK+ G     V+ + ++   PE        G +
Sbjct: 118 DGAPGD---TFLATDSVASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVD---RTKGCM 171

Query: 179 EKAMTENGIKV--ETVRAGLDPAEAQNIIAQFLIANPNVKALFGTGSVTSTVGAGAIKDA 236
           E     +G+K+  E         E   I+   L ANP+V  +F      +   A AIK A
Sbjct: 172 ESVKANSGVKIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVA 231

Query: 237 GVD--IPFGGFDLAVEIVNAVESGAMYATMDQQPYLQG 272
                I  GGFD     + A+++G    T  QQ    G
Sbjct: 232 NPSQKIVVGGFDGDTAALEALKNGVFDVTATQQTQKMG 269