Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  147 bits (370), Expect = 5e-40
 Identities = 92/280 (32%), Positives = 144/280 (51%), Gaps = 1/280 (0%)

Query: 76  YLSPQNLTILMKAIPVLGCLALGAGVLMIAGEFDLSIGSVYTFTAVLMASLVNAGLSAFI 135
           +LSP N+  L  AI  +G  A      + +G FDLS+GSV     V+   ++    S  +
Sbjct: 43  FLSPLNMRGLGLAISTVGIAACTMLFCLASGHFDLSVGSVIACAGVVAGIVIRDTDSVVL 102

Query: 136 AAPIAILTGLLIGSLNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFT 195
               A+  GL++G +NG +  +  + + I TL  +   RG   +++    V    E  F 
Sbjct: 103 GVSAALAMGLVVGLINGIVIAKLRINALIATLATMQIVRGLAYIFSNGKAVGVMDEGFFV 162

Query: 196 SLFSGTLFGVNAAFIWIVLFVTGFHLLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKLI 255
              +G L GV    I  VL    F  LL+   +G +  A GGN+ AA   G+N  R K+I
Sbjct: 163 -FGNGQLLGVPVPIIITVLCFVFFGWLLNYTTYGRNTMAIGGNQEAALLAGVNVDRTKII 221

Query: 256 AFAIAGGMAAVAGILATARVGSVQPGQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGV 315
            FA+ G + A+AG++  +R+ S QP  G G EL  I+ACV+GG+SL GG G I  +  GV
Sbjct: 222 IFAVHGLIGALAGVILASRMTSGQPMIGQGFELTVISACVLGGVSLSGGIGMIRHVIAGV 281

Query: 316 LLIHTITDVLLLLRAPGFYLDMFIATLIVLAAIFNHLIER 355
           L++  I + + L     FY  +   ++++LA I + + +R
Sbjct: 282 LILAIIENAMNLKNIDTFYQYVIRGSILLLAVIIDRMKQR 321