Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  150 bits (380), Expect = 4e-41
 Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 8/309 (2%)

Query: 41  LKQIMGMPAGAIFLVFMTLQIVCIAGALLYPDEFRYLSPQNLTILMKAIPVLGCLALGAG 100
           L +++  PA   F  F+ L +V +   +L  D F  L+  NL+ + + + +   +A+G  
Sbjct: 23  LARLVRSPA---FYPFVGLVVVTLV-MILASDTF--LTASNLSNIARQVSINAIIAVGMT 76

Query: 101 VLMIAGEFDLSIGSVYTFTAVLMASLVNAGLSAFIAAPIAILTGLLIGSLNGHITLRFGL 160
            +++ G  DLS+G V   +  L A L+ AGL   +A    +L G+  G  NG       +
Sbjct: 77  CVILTGGIDLSVGPVMALSGTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHM 136

Query: 161 PSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFTSLFSGTLFGVNAAFIWIVLFVTGFH 220
           P  IVTL  +   RG  L+Y     +   P+  F      +LFG+    + ++L     +
Sbjct: 137 PPIIVTLATMGIARGLGLMYTDGYPISGLPD-WFAFFGRESLFGIQVPILIMLLTYLVAY 195

Query: 221 LLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKLIAFAIAGGMAAVAGILATARVGSVQP 280
           +LL   R G +++A GGN  A    G+  +R KL+ + I+G  AA+AG++ T+R+ S QP
Sbjct: 196 VLLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQP 255

Query: 281 GQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGVLLIHTITDVLLLLRAPGFYLDMFIA 340
             G   EL AIAA V+GG S+ GGRG I+G  LG +L+  + + L +L     Y+   I 
Sbjct: 256 NAGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSP-YVQSVIK 314

Query: 341 TLIVLAAIF 349
             I+L AIF
Sbjct: 315 GGIILLAIF 323