Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  140 bits (352), Expect = 6e-38
 Identities = 98/292 (33%), Positives = 147/292 (50%), Gaps = 16/292 (5%)

Query: 75  RYLSPQNLTILMKAIPVLGCLALGAGVLMIAGEFDLSIGSVYTFTAVLMASLVNAGLSAF 134
           R+L+  NL+++++ + V+G +A+G  ++++    DLS G V     ++M+          
Sbjct: 33  RFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDLSCGMVMALGGIIMSKFAT---ELG 89

Query: 135 IAAPIAILTGL----LIGSLNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDP 190
           + AP+AIL G+    L G LNG +  R  LP FIVTLG L        LY+ + Q   D 
Sbjct: 90  LPAPVAILCGIGVTTLFGLLNGLLVTRIKLPPFIVTLGTLNIAFAITQLYSSS-QTITDL 148

Query: 191 EPVFTSLFSGTLFGV-NAAFIW---IVLFVTGFH-LLLHRHRFGNHVFATGGNRGAAEAI 245
               T L  GT F + NA   W   ++L + G    +L     G H++A G N  A   +
Sbjct: 149 PGGLTGL--GTTFSIGNAEVAWGAVLMLVLYGLAWFVLRETAAGRHIYAVGNNAEATRLV 206

Query: 246 GINTSRVKLIAFAIAGGMAAVAGILATARVGSVQPGQGAGLELQAIAACVIGGLSLRGGR 305
           GI T RV L  +  AG +  +A +L+ AR G   P  G    L AI A V+GG SL GGR
Sbjct: 207 GIPTQRVLLGVYVAAGVLYGIASLLSVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGR 266

Query: 306 GSIIGIFLGVLLIHTITDVLLLLRAPGFYLDMFIATLIVLAAIFNHLIERRG 357
           G ++G  +GVL++    + L L+     Y  +    L++LA   + L  RRG
Sbjct: 267 GIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVLVTGVLVILAVTADQL-SRRG 317