Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 1e-38
 Identities = 104/336 (30%), Positives = 162/336 (48%), Gaps = 14/336 (4%)

Query: 22  TPVLAESAAPRSRTQRQSILKQIMGMPAGAIFLVFMTLQIVCIAGALLYPDEFRYLSPQN 81
           TP+  + AAP  R+     L   +G+ AGA+  + +    +             + S   
Sbjct: 4   TPLNNQDAAPVRRSGTYFGLGTYLGL-AGALLAMIVLFSFL----------SSHFWSYGT 52

Query: 82  LTILMKAIPVLGCLALGAGVLMIAGEFDLSIGSVYTFTA-VLMASLVNAGLSAFIAAPIA 140
            + L   IP L  LA+G   ++I G  DLS+GSV    A  +  +++  G     +A + 
Sbjct: 53  FSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAASTVSVAILGWGWGVLPSALLG 112

Query: 141 ILTGLLIGSLNGHITLRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFTSLFSG 200
           +    L GS+ G +T+ + +PSFIV+LG L   RG    +  +          + S  + 
Sbjct: 113 MAVAALAGSITGGVTVAWRIPSFIVSLGVLEMARGLAYQFTDSRTAYIGDAYAWFS--NP 170

Query: 201 TLFGVNAAFIWIVLFVTGFHLLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKLIAFAIA 260
             FGV+ AFI  +L +    L+L R  FG ++   G N  A    GI+    K++ FA+ 
Sbjct: 171 VAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALM 230

Query: 261 GGMAAVAGILATARVGSVQPGQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGVLLIHT 320
           G +A +A +   +R+ +  P  G+GLELQ IAA VIGG SL GGRGS+I  F GVL+I  
Sbjct: 231 GLLAGLAALFQISRLEAADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISV 290

Query: 321 ITDVLLLLRAPGFYLDMFIATLIVLAAIFNHLIERR 356
           +   L  + A      +    +IV+A + +    RR
Sbjct: 291 LAAGLAQIGASEPTKRIITGAVIVIAVVLDTYRSRR 326