Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 342 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  153 bits (386), Expect = 7e-42
 Identities = 104/313 (33%), Positives = 158/313 (50%), Gaps = 19/313 (6%)

Query: 48  PAGAIFLVFMTLQIVCIAGALLYPDEFRYLSPQNLTILMKAIPVLGCLALGAGVLMIAGE 107
           P   IF V + + +V      ++  +   L+ Q LTI++  + V+G +A+G   ++I G 
Sbjct: 24  PEANIFFVLIGIALVYEILGWIFIGQSFLLNQQRLTIMILQVSVIGIIAVGVTQVIITGG 83

Query: 108 FDLSIGSVYTFTAVLMASLVNAG------------LSAFIAAPIAILTGLLIGSLNGHIT 155
            DLS GSV   TA+L AS+  +             L  FI   + IL G L G +NG + 
Sbjct: 84  IDLSSGSVVGLTAMLAASVGQSSTWPRALYPGLTDLPFFIPLAVGILAGALAGFINGQLI 143

Query: 156 LRFGLPSFIVTLGGLLFWRGAVLLYNGAVQVRFDPEPVFTSLFSGTLFGVNAAFIWIVLF 215
            R  +P FI TLG ++  RG    Y      +  P    T  F+    GV    +++V+ 
Sbjct: 144 ARTKIPPFIATLGMMVTARGLSKWYT-----KGQPISGLTDGFTFIGTGVWPVVVFLVVA 198

Query: 216 VTGFHLLLHRHRFGNHVFATGGNRGAAEAIGINTSRVKLIAFAIAGGMAAVAGILATARV 275
           +  FH+ L   R+G   +A G N+ AA   GIN     +  +AIAG +A +AG++  AR 
Sbjct: 199 II-FHVALRYTRYGKFTYAIGANQQAARVSGINIEAHLIKVYAIAGLLAGLAGVVTAARA 257

Query: 276 GSVQPGQGAGLELQAIAACVIGGLSLRGGRGSIIGIFLGVLLIHTITDVLLLLRAPGFYL 335
            + Q G G   EL AIAA VIGG SL GG G I G  +G +++  +T     LR   +Y 
Sbjct: 258 QTAQAGMGVMYELDAIAAAVIGGTSLAGGAGRITGTVIGTIILGVMTSGFTFLRVDAYYQ 317

Query: 336 DMFIATLIVLAAI 348
           ++ +  LI++AA+
Sbjct: 318 EI-VKGLIIVAAV 329