Pairwise Alignments

Query, 246 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 5e-36
 Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 4/238 (1%)

Query: 7   LLELHNISKSFGALTALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTDGYLSV 66
           LLE+ +I K FGA+T LR++S     G+V  + G+NGAGKST + ++ GIH P  G + +
Sbjct: 17  LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRI 76

Query: 67  DGKKTTFSCRSDSADAGIETIYQHTALVDSLSITRNIFMGRELTDRFGFLRQREMRDIAM 126
            G+   F   S +  AGI  I+Q  AL+   ++ +NIF+G E   R+G + ++ M   A 
Sbjct: 77  GGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHE-PSRWGVIDRKAMNAGAE 135

Query: 127 EVLQNAVHISGIDSPDTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSVRETEAL 186
             L+    +     P T  G LS  ++Q V IA+AV    R+L+LDEPT+AL   E+  L
Sbjct: 136 AALR---RVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKL 192

Query: 187 LNQVLKLKAENVSSVLVTHNLYHAYQVCDRFVIMSHGTKVFDVQKADTTISQLTEYVV 244
            + + +L+   V+ + ++H +     + D   ++  G  +  +  A+ T+ ++   +V
Sbjct: 193 FDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMV 250



 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 17/216 (7%)

Query: 18  GALTALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTDGYLSVDGKKTTFSCRS 77
           G    L  +   +  GE+VG+ G   +GK      + G  + T G +     K       
Sbjct: 276 GGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPR 335

Query: 78  DSADAGI---------ETIYQHTALVDSLSITRNIFMGRELTDRFGFLRQREMRDIAMEV 128
           ++A  GI         E +    +L D+ ++T     G  L       R R + D     
Sbjct: 336 EAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRALAG-PLAGAGSAARSRSLID----A 390

Query: 129 LQNAVHISGIDSPDTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSVRETEALLN 188
           L N V +   D  D  VG LSGG +Q V +AR +  + R+ ++ EPT  + V   +A + 
Sbjct: 391 LLNKVEVRAADF-DMPVGALSGGNQQKVMVARWMAREPRLWVICEPTRGIDV-GAKATIY 448

Query: 189 QVLKLKAENVSSVL-VTHNLYHAYQVCDRFVIMSHG 223
           ++L+  A+   +VL V+ ++     +CDR  +M+ G
Sbjct: 449 RLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALG 484