Pairwise Alignments

Query, 246 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 5e-38
 Identities = 90/244 (36%), Positives = 132/244 (54%), Gaps = 6/244 (2%)

Query: 2   MSTPNLLELHNISKSFGALTALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTD 61
           MSTP +LEL  I K+FGA  AL   S  +  G V GL+G+NGAGKST + +++GIH+P  
Sbjct: 1   MSTP-VLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDA 59

Query: 62  GYLSVDGKKTTFSCRSDSADAGIETIYQHTALVDSLSITRNIFMGRELTDRFGFLRQREM 121
           G L +DG+             GI  I+Q   L    ++   +F G E   RFG L  R  
Sbjct: 60  GSLLLDGQPHGHFSPRQVERLGIGFIHQERLLPARFTVGEALFFGHER--RFGPLLDR-- 115

Query: 122 RDIAMEVLQNAVHISGIDSP-DTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSV 180
           R    E  +      G+  P + L+G LS  ++Q V I RA+  K RVL+ DEP+ AL  
Sbjct: 116 RSQQREAARLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVALVQ 175

Query: 181 RETEALLNQVLKLKAENVSSVLVTHNLYHAYQVCDRFVIMSHGTKVFDVQKADTTISQLT 240
           RE E LL  V +L+ + ++ V ++H L     +CDR  ++ +G  V +V   +T++ Q+T
Sbjct: 176 REVERLLRIVQRLRDDGLAIVYISHYLQEIEALCDRVTVLRNGRDVAEVSPRNTSLEQIT 235

Query: 241 EYVV 244
             +V
Sbjct: 236 RLMV 239



 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 12/216 (5%)

Query: 15  KSFGALTALRNLSFHIGEGEVVGLLGDNGAGKSTTVNLISGIHKPTDGYLSVDGKKTTFS 74
           +  G   A + +   +  GE+VGL G  G+G    +  + G+  P  G + +DG+  +  
Sbjct: 262 RGLGRARAYQGIDLQVRRGEIVGLTGLVGSGAKELLRSLFGLAPPDSGEVRLDGQPLSLR 321

Query: 75  CRSDSADAGI-----ETIYQHTALVDSLSITRNIFMGR-ELTDRFGFLRQREMRDIAMEV 128
              ++   G+     E   Q  AL   LS+  N  +       R G L     R   +E+
Sbjct: 322 SPREAVAQGVALMPEERRRQGVAL--DLSVQENTTLAALSRFVRLGLLSPARERHTTLEL 379

Query: 129 LQNA-VHISGIDSPDTLVGNLSGGQKQAVAIARAVYFKKRVLLLDEPTSALSVRETEALL 187
           ++   +   G  +    V  LSGG +Q VA+A+       + LLDEP+  + V     + 
Sbjct: 380 IERLRIKAHGAHAK---VRQLSGGNQQKVALAKWFARCSSLYLLDEPSVGIDVGAKVEIY 436

Query: 188 NQVLKLKAENVSSVLVTHNLYHAYQVCDRFVIMSHG 223
             + +L  E    ++++ +L     +CDR  +M  G
Sbjct: 437 RLIGELVKEGAGVLILSSDLPELIGLCDRIHVMHRG 472