Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 80/305 (26%), Positives = 126/305 (41%), Gaps = 18/305 (5%)

Query: 1   MTIRKMLLASAAITCAAMPASAFADTSAKKIALSNNYAGNSWRQAMLTSWEKVTGE--AV 58
           M +   L A+AA++  A   +  AD    K+      A    +   + +W +   E  AV
Sbjct: 1   MKLGTTLAATAALSLLACSIAMAADGKTYKVGA----AVYGLKGQFMQNWVRELKEHPAV 56

Query: 59  KAGIVASADAFTTAENQATEQAAQIQNMILQGYDAIVLNAASPTALNGAVKEACDAGITV 118
           K G V            A  Q  QI+NM+ Q YDAI+       A  G VK A    + V
Sbjct: 57  KDGTVQLT--VFDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVV 114

Query: 119 VSFDGIVTEPCAWRIAVDFKEMGRSQVEYLSNKLPDGGNLLEIRGLAGVFVDDEISAGIH 178
           ++ +  V +     +  D  E GR Q + + +KL   GN++ I+G  G     +   G  
Sbjct: 115 IASNTKVADASVPYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGEL 174

Query: 179 EGVKQFPQFKIAGSVHGDWAQDVAQKAVAGILPSLP-DIVGVVTQGGD-GYGAAQAIAA- 235
           E + + P  KI      +W +  A       L + P  I GV+ Q  D   GA QA+ + 
Sbjct: 175 EVLGKHPDIKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALKSH 234

Query: 236 --TDRKMPIIVMGNREDELKWWKEQKDANGYETMSVSIAPGVSTLAFWVAQQILDGKEVK 293
             T + +P+  +    D ++  K+ +      T  +  A   S  A  VA + L GK+ K
Sbjct: 235 GLTSKDVPVTSIDGMPDAIQAAKKDE-----VTTFLQDAQAQSQGALDVALRALAGKDYK 289

Query: 294 KDLVV 298
              V+
Sbjct: 290 PQSVI 294