Pairwise Alignments

Query, 487 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 6e-64
 Identities = 163/504 (32%), Positives = 259/504 (51%), Gaps = 43/504 (8%)

Query: 8   DVAKAIIAVDGAKVSFGAVKALDGVTLRVMPGECVGLVGHNGAGKSTIVSVINGGLTPHH 67
           +   A++ + G    FGA +AL GV   +  GE   L G NGAGKST++++I+G   P  
Sbjct: 2   NAVSALLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDE 61

Query: 68  GIVTSDGERQERYGINAARDRGVRCVFQELSLCPNLSIVENTRLVHRTLGGFGW------ 121
           G  + DG +    G   A   G+  V QE++LC + ++ EN  +     G   W      
Sbjct: 62  GETSLDGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASL 121

Query: 122 RLRAAKIIEKSLDAVFPGHGIDSGRTVGDLSIAERQMVEIALAFSDAGTPARLVILDEPT 181
             RAA+++++       G  +D    V DLSI+ +Q++EIA A +      +++ILDEPT
Sbjct: 122 NERAARVLQRL------GQDVDPAALVKDLSISTQQLIEIAKALT---LDCKVLILDEPT 172

Query: 182 SSLDASLARQMLDHVRRFIAAGGSVIFISHILHEILETADRIVVMKDGRVVAERPAHRFD 241
           ++L  + +  +   +    A G  +I+ISH + EI     R+ V++DGR V   P    D
Sbjct: 173 AALTDNESAALFKVLHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELD 232

Query: 242 HHGLVEAMGSVAKAETRQRPVCDQPAA---PVILSHEAA------GIPFTARTGEIIGLA 292
              LV  M  V +      P     AA   PV+   + A      G+ FT R GEI+G+A
Sbjct: 233 ADALVRRM--VGRDLGNYYPPKHGDAAHGEPVLEVSDIADGERVHGVSFTLRRGEILGIA 290

Query: 293 GLAGHGQTEL---LLALHAARSGNWLPQGNPL------------VTFVAGDRRLNGVFEL 337
           GL G G++EL   +  L  A  G    +G  L            + +++ DR+  GV+  
Sbjct: 291 GLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVYLD 350

Query: 338 WSILRNFSIASLGDMSRR-GLVLEAGEKTRGTAWKERIEIRTPDLNNRILSLSGGNQQKV 396
             I +N +  +L  +S R GL+  A E+        ++++++  ++  + SLSGGNQQKV
Sbjct: 351 LPIAQNIASMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKV 410

Query: 397 LFARALATRAPIVLMDDPMRGVDVGTKQEVYAIIREEAAAGRTFIWYSTEMDEVC-LCDR 455
             A+ LAT   ++LMD+P RGVDVG K E++ I+RE A+ G   +  S+E+ E+  LCDR
Sbjct: 411 AIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEIIGLCDR 470

Query: 456 VYVFREGRITAELGGDAVDEANII 479
             V R+GR+  E+  + + E  ++
Sbjct: 471 ALVIRDGRLAGEVQDNEMTEEALL 494



 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 23/239 (9%)

Query: 31  GVTLRVMPGECVGLVGHNGAGKSTIVSVINGGLTPHHGIVTSDGERQE--------RYGI 82
           GV+  +  GE +G+ G  GAG+S +   + G  T   G V   G            R GI
Sbjct: 276 GVSFTLRRGEILGIAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGI 335

Query: 83  N-AARDRGVRCVFQELSLCPNLSIVENTRLVHRTLGGFGWRLRAAK---IIEKSLDAVFP 138
              + DR    V+ +L +  N++ +   R+  R    FG   RAA+    ++        
Sbjct: 336 AYLSEDRKAAGVYLDLPIAQNIASMALRRVSSR----FGLLQRAAERKLALDLGGKLKLK 391

Query: 139 GHGIDSGRTVGDLSIAERQMVEIALAFSDAGTPARLVILDEPTSSLDASLARQMLDHVRR 198
             G+D    V  LS   +Q V IA   +   T   ++++DEPT  +D   A+  + H+ R
Sbjct: 392 SDGVDID--VASLSGGNQQKVAIAKLLA---TNPSVLLMDEPTRGVDVG-AKSEIHHILR 445

Query: 199 FIAAGG-SVIFISHILHEILETADRIVVMKDGRVVAERPAHRFDHHGLVEAMGSVAKAE 256
            +A+ G  V+ IS  L EI+   DR +V++DGR+  E   +      L+     + + E
Sbjct: 446 ELASQGVGVVVISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASGLCEEE 504