Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 6/305 (1%)

Query: 5   LSSDAIRLVIPALSLSLLLAAVFWLQPRAMSYIG-LNLLFNLAVPIALATIAQMLVMAVN 63
           LS D  +L+   L+  LL  A+        +    LN+L   ++   LA+    LV+   
Sbjct: 16  LSKDMQQLIYRLLAAGLLCVALSVATDAFFTTNNILNVLRQASLLFFLAS-GLTLVILTG 74

Query: 64  DLDLSMGAFVSFVACVTATFLR--DAPAIGILI-LAGAVAAYAAIGVVIHLRNLPSIVVT 120
            LDLS+GA +   AC+ AT ++   +PA+G L  LA   A     G+++    +PS + T
Sbjct: 75  GLDLSVGANIGLSACLAATVIKATGSPALGTLTGLATGCAIGVCNGLMVAKLRIPSFIAT 134

Query: 121 LGMSFVWGGLAVLLLPAPGGQA-PDWVRWLMTVKPPLAPMAIVASIIIAVIAHFIVKRSS 179
            GM +V  GL    +        P   R + +      P+ +   I   +      +R+ 
Sbjct: 135 YGMLWVLHGLTYYYMAGETIHGFPPGFRQIGSGYFLGIPIPVYLMIGFLIAGSVFAQRTV 194

Query: 180 LGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYT 239
            G  I  +G N  +    G  +       YA +G  A +A I  +    SA+ +I    T
Sbjct: 195 WGQQIYAIGANPVAARLTGIPVDRRLILVYAFSGAMAGVASIVFLARLNSAEGDIGEAMT 254

Query: 240 LLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVL 299
           L +IA V++GG    GG  S  G  +GAL LTL  + ++ L ++  WQ    G I+I  +
Sbjct: 255 LPAIAAVLIGGASLFGGVGSVFGTFVGALILTLVLNGMNLLAVNSSWQPLVTGVIVIFAV 314

Query: 300 ALRLM 304
            L ++
Sbjct: 315 WLDMI 319