Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  108 bits (269), Expect = 2e-28
 Identities = 87/312 (27%), Positives = 144/312 (46%), Gaps = 11/312 (3%)

Query: 11  RLVIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSMG 70
           R ++  +++++LLA +    P  ++   L  +++    + +  + QM V+    +DLSM 
Sbjct: 9   REILLVVAIAVLLALIALRFPAFVAPSNLARVYSDTSILVILALGQMAVILTRCIDLSMA 68

Query: 71  AFVSFVACVTATFLRDAPAIGILILAGAVAAYAAI-----GVVIHLRNLPSIVVTLGMSF 125
           A ++    V A      P + I ++  AV A         G ++   N+P IVVTLG   
Sbjct: 69  ANLALCGMVAAMLNNAFPGLPIPLIIVAVMALGGFLGSINGTLVWKLNIPPIVVTLGTLT 128

Query: 126 VWGGLAVLLLPAP---GGQAPDWVRWLMTVKPPLAPMAIVASIIIAVIAHFIVKRSSLGV 182
           ++ GL  +L         +  D  + L  +     P+    S++I  +   ++ R+ LG 
Sbjct: 129 IYRGLIFVLTNGKWINAHEMSDAFKALPRLDVAGMPVLSWLSLVIVALMFLVMGRTPLGR 188

Query: 183 LIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYTLLS 242
               VGGN  +    G  +   R  AY L+G  A L+G   V     A  +IA  + L  
Sbjct: 189 AFYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYVDIAAGFELDI 248

Query: 243 IAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVLALR 302
           IA  ++GG    GG  S  GAV+GAL L +  + L  + ISP  Q+   G ++II +A+ 
Sbjct: 249 IAACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISGTVIIIAVAVN 308

Query: 303 LMLNRLERREKR 314
               R ERR+ R
Sbjct: 309 A---RAERRKGR 317