Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 16/303 (5%)

Query: 11  RLVIPALSLSLLLAAVFWLQ----PRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLD 66
           +L++    L ++ AA F +     P  ++   +  L    V I +     M  +A  D D
Sbjct: 7   KLLLGEQGLLVIFAAAFVVVALTVPNFLTERNMLGLLQSVVTIGVVACTMMFCLASRDFD 66

Query: 67  LSMGAFVSFVACVTATFLRDAPAIGILILAGAVAAYA-------AIGVVIHLRNLPSIVV 119
           LS+G+ V+F   V    +  + A G ++L G +AA A       A G+VI    + +++ 
Sbjct: 67  LSVGSTVAFSGMVA---VMASNATGSIVL-GLLAALACGGIVGLANGIVIARFRINALIT 122

Query: 120 TLGMSFVWGGLAVLLLPAPGGQAPDWVRWLMTVKPPLA-PMAIVASIIIAVIAHFIVKRS 178
           TL    +  G A++          D V + +++   L  P  I    +  ++  F++ R+
Sbjct: 123 TLATMQIVRGFALIASDGRAVGINDPVFYQLSLSKFLTVPTPIWVMALFFIVFGFLLNRT 182

Query: 179 SLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRY 238
             G     +GGN  +   AG  +   R   +AL GL   +AG+ L    TS   N A   
Sbjct: 183 VFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNAATGL 242

Query: 239 TLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIV 298
            L  I+  +LGG    GGR +  G V+G L + +A + ++ L I   +Q   +G IL+I 
Sbjct: 243 ELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLILLIA 302

Query: 299 LAL 301
           + L
Sbjct: 303 VLL 305