Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 8e-23
 Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 14/295 (4%)

Query: 13  VIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSMGAF 72
           ++  + L   L++ FW      SY   + L N    + +  +    V+ +  +DLS+G+ 
Sbjct: 33  LLAMIVLFSFLSSHFW------SYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSV 86

Query: 73  VSFVACVTATFLRDAPAIGIL---ILAGAVAAYAAI---GVVIHLRNLPSIVVTLGMSFV 126
           ++  A   +  +      G+L   +L  AVAA A     GV +  R +PS +V+LG+  +
Sbjct: 87  LALAASTVSVAILGW-GWGVLPSALLGMAVAALAGSITGGVTVAWR-IPSFIVSLGVLEM 144

Query: 127 WGGLAVLLLPAPGGQAPDWVRWLMTVKPPLAPMAIVASIIIAVIAHFIVKRSSLGVLIRG 186
             GLA     +      D   W           A + ++++ V+A  ++ R+  G  + G
Sbjct: 145 ARGLAYQFTDSRTAYIGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIG 204

Query: 187 VGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYTLLSIAGV 246
           +G N+ +V  AG      +   +AL GL A LA +  +    +AD N      L  IA V
Sbjct: 205 IGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAAV 264

Query: 247 ILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVLAL 301
           ++GG    GGR S I    G L +++ ++ L+ +  S   +    GA+++I + L
Sbjct: 265 VIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVL 319