Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 332 a.a., Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 14/275 (5%)

Query: 41  LLFNLAVPIALATIAQMLVMAV--NDLDLSMGAFVSFVACVTAT-FLRDAP---AIGILI 94
           LLF+ +  I +  +A  L M +    +D+S G+ +   A      F    P   AI I +
Sbjct: 37  LLFSTSDFICIGIVALPLTMVIVSGGMDISFGSTIGLCAITLGVLFQLGMPLPLAIIITL 96

Query: 95  LAGAVAAYAAIGVVIHLRNLPSIVVTLGMSFVWGGLAVLLLPAPGGQAPDWVRWLMTVKP 154
           L GA+      G++I+    P +V+TLG  +++GG A+LL    G    + +    T   
Sbjct: 97  LLGAICGLINAGLIIYTGVNP-LVITLGTMYLFGGSALLLSGMAGATGYEGIGGFPTAFT 155

Query: 155 PLA-------PMAIVASIIIAVIAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARAT 207
             A       PM ++  ++  +    ++ R+ +G  +  +G + R  + +   +     T
Sbjct: 156 DFANISFLGIPMPLIFFLVCCLFFWLLMHRTHMGRNVFLIGQSARVAQYSAIPVNRTLYT 215

Query: 208 AYALAGLFAVLAGIALVGLTTSADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGA 267
            YA+ G  + +A + LV    SA +++   + + +I  V+LGG    GG  S +G+ + A
Sbjct: 216 VYAMTGCASAIAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIMGSALAA 275

Query: 268 LTLTLASSFLSFLRISPDWQIGAQGAILIIVLALR 302
           L +      L    +         GA+LI+V+  R
Sbjct: 276 LLVGFLQQGLQMAGVPNQISSALSGALLIVVVVGR 310