Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  111 bits (278), Expect = 2e-29
 Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 32/312 (10%)

Query: 10  IRLVIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSM 69
           I L+I  L LSLL      L        G N++  ++V I ++ +   LV+    +DLS+
Sbjct: 11  IALIILCLVLSLLSDRFLTLAN------GWNVMRQVSVNICIS-VGMTLVILTAGIDLSV 63

Query: 70  GAFVSFVACVTATFLRDAPAIGILILAGAVAAYAAI--------------GVVIHLRNLP 115
           G+ ++    VTA+ +++  A+  L L    A   A+              G  I    +P
Sbjct: 64  GSILALCGAVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVP 123

Query: 116 SIVVTLGMSFVWGGLAVLLLPA--PGGQAPDWV----RWLMTVKPPLAPMAIVASIIIAV 169
             V TL M  +  GL +L        G   D+      W + +     PM +  + +I  
Sbjct: 124 PFVATLAMLTIARGLTMLWTGGFPINGLGEDFAFLGTGWFLGI-----PMPVWITAVIVA 178

Query: 170 IAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTS 229
           +A  + K++  G  +  +GGN+R+   +G +I   + T YA+AG  A + G+ +     S
Sbjct: 179 LAVLLTKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDS 238

Query: 230 ADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIG 289
           A  N  + Y L +IA V++GG   +GG+ + +GAV+G + + + ++ L  L +SP WQ  
Sbjct: 239 AQPNAGISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQV 298

Query: 290 AQGAILIIVLAL 301
            +GA++++ + +
Sbjct: 299 VKGAVILLAVVI 310