Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 332 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 23/323 (7%)

Query: 3   FRLSSDAIRLVIPALSLSLLLAAVFWLQP-RAMSYIGLNLLFNLAVPIALATIAQMLVMA 61
           F   S+ I+L++  +   ++ A + W+ P + ++Y     +  +   + + +IA M+ M 
Sbjct: 11  FGNDSNIIQLLVITV---IVFALMTWMNPGKFLNYYNFESISYIMPELGILSIAMMIAML 67

Query: 62  VNDLDLSMGAFVSFVACVTATFLRDA---------------PAIGILILAGAVAAYAAI- 105
              +DLS+    +    +   +                     +GI +LA AV   A + 
Sbjct: 68  TGGIDLSVVGIANLAGIIAGVYFHSTMVQAGQSSTSGVVFYTGLGI-VLAMAVGLLAGLI 126

Query: 106 -GVVIHLRNLPSIVVTLGMSFVWGGLAVLLLPAPGGQA-PDWVRWLMTVKPPLAPMAIVA 163
            G+++    +  I+ TLG   V  GLA++L   P     PD   W+   K        + 
Sbjct: 127 NGLLVAKLRITPILATLGTGQVLMGLALVLTGGPAIVGFPDAWNWIGNGKILGIATPFLL 186

Query: 164 SIIIAVIAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIAL 223
            I + +    ++ RS+LG+ +  +G N R+   AG         +Y L G+ A LAGI L
Sbjct: 187 FIGVCITVAILLTRSTLGINLMLIGTNPRAAVFAGIRKDRMMLYSYMLTGVLASLAGIIL 246

Query: 224 VGLTTSADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRIS 283
            G T +A ++    Y L ++   +LGG    GG+   +G  I  + L L SS    +R S
Sbjct: 247 SGRTNAAKSDYGASYLLQAVLIAVLGGTNPAGGKGRVLGIAIALIALMLLSSGFQMMRFS 306

Query: 284 PDWQIGAQGAILIIVLALRLMLN 306
                   GA LI+V+A+    N
Sbjct: 307 NHLIDFIWGAFLILVIAINAWRN 329