Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 2e-27
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 19/312 (6%)

Query: 7   SDAIRLVIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVM--AVND 64
           +D + + I A +  LL+  +  L P       +  L  +A  + +    Q LV+      
Sbjct: 13  TDPLTIAIGASAFLLLVGEL--LSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREG 70

Query: 65  LDLSMGAFVSFVACVTATFLRDAPA---IGILILAGAVAAYAAI-GVVIHLRNLPSIVVT 120
           +DLS+GA +S  A +    +    A   + IL+  G       I G+ I    +P +V+T
Sbjct: 71  IDLSVGAMISLGAVLAGNMMNGQNAGIPLAILVAGGIPFLIGLINGLGITFVRIPPLVMT 130

Query: 121 LGMSFV-WGGLAVLLLPAPGGQAPDWVRWLMTVKPPLA---PMAIVASIIIAVIAHFIVK 176
           LGM+ V  GGL V     P G A   +     +  PL    P  +   + IA I  F+++
Sbjct: 131 LGMTAVIQGGLVVYSQGVPSGAAAPLLAGF--INRPLIFGIPGVLFVWLGIAAIMLFVLR 188

Query: 177 RSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIAL 236
           R++ G  I  +G N+R+    G  +   R   Y L+GLFA L G+ ++G T ++  ++  
Sbjct: 189 RTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFISVGD 248

Query: 237 RYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAIL- 295
           +Y L SI  V++GG    GG    +G + GA+ LT+  S L  L +     + A+  I  
Sbjct: 249 QYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNL----DVWARQIIFG 304

Query: 296 IIVLALRLMLNR 307
           + +LAL L+  R
Sbjct: 305 VTLLALMLLYGR 316