Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  119 bits (299), Expect = 7e-32
 Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 12/304 (3%)

Query: 13  VIPALSLSLLLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSMGAF 72
           +I  + L++L+A   +LQP  +    L       +P+ L  I Q  V+   D+DLS+G+ 
Sbjct: 13  IITLVVLAVLVAVNTFLQPSFVQPSVLQSNLTTFLPLILVAIGQTYVILAGDIDLSVGSI 72

Query: 73  VSFVACVTATFLRDAPAIGILILAGAVAAYAAIGVVIHLRN--------LPSIVVTLGMS 124
           V+    VT + +         + AG +AA AA+G++  L N           IV T    
Sbjct: 73  VALANVVTVSVVAALGGTTGAVFAG-MAAGAAVGLLCGLVNGLFISGLRFQPIVTTFATG 131

Query: 125 FVWGGLAVLLLPAPGGQAPDWVRWLMTVKPPLAPMAIVASIIIAVIAH-FIVKRSSLGVL 183
            ++ GLA+ +LP  G   P+   +  T       +  V  ++I  IA   IV R      
Sbjct: 132 IIFAGLAIWVLPQAGLPVPE--AYWQTYSGSFVGLPFVLWVLIGGIAFTLIVSRIPFHTH 189

Query: 184 IRGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYTLLSI 243
           +  VGGN+    + G  +   R  AY ++GLF+ LA + L G T S D  +     L SI
Sbjct: 190 LLAVGGNRTGAFQTGLRLSGIRIGAYMISGLFSALAALCLTGETASGDPLLGASLALSSI 249

Query: 244 AGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVLALRL 303
           + V+LGG   +GG  S  G++ GAL L +  + + F  +  ++Q   QG I++  LA  +
Sbjct: 250 SAVVLGGTALSGGFGSSTGSIAGALVLGMIGNVIFFAGLPFEYQTLVQGLIVLTALAGGV 309

Query: 304 MLNR 307
           ++ R
Sbjct: 310 LVTR 313