Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 342 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 25/310 (8%)

Query: 22  LLAAVFWLQPRAMSYIGLNLLFNLAVPIALATIAQMLVMAVNDLDLSMGAFVSFVACVTA 81
           +L  +F  Q   ++   L ++      I +  +    V+    +DLS G+ V   A + A
Sbjct: 41  ILGWIFIGQSFLLNQQRLTIMILQVSVIGIIAVGVTQVIITGGIDLSSGSVVGLTAMLAA 100

Query: 82  TF-------------LRDAP---AIGILILAGAVAAYAAIGVVIHLRNLPSIVVTLGMSF 125
           +              L D P    + + ILAGA+A +   G +I    +P  + TLGM  
Sbjct: 101 SVGQSSTWPRALYPGLTDLPFFIPLAVGILAGALAGFIN-GQLIARTKIPPFIATLGMMV 159

Query: 126 VWGGLAVLLLPA-PGGQAPDWVRWLMTVKPPLAPMAIVASIIIAVIAHFIVKRSSLGVLI 184
              GL+       P     D   ++ T   P     +V  +++A+I H  ++ +  G   
Sbjct: 160 TARGLSKWYTKGQPISGLTDGFTFIGTGVWP-----VVVFLVVAIIFHVALRYTRYGKFT 214

Query: 185 RGVGGNQRSVERAGWSIVAARATAYALAGLFAVLAGIALVGLTTSADANIALRYTLLSIA 244
             +G NQ++   +G +I A     YA+AGL A LAG+       +A A + + Y L +IA
Sbjct: 215 YAIGANQQAARVSGINIEAHLIKVYAIAGLLAGLAGVVTAARAQTAQAGMGVMYELDAIA 274

Query: 245 GVILGGGEFTGGRVSPIGAVIGALTLTLASSFLSFLRISPDWQIGAQGAILIIVLALRLM 304
             ++GG    GG     G VIG + L + +S  +FLR+   +Q   +G  LIIV A+   
Sbjct: 275 AAVIGGTSLAGGAGRITGTVIGTIILGVMTSGFTFLRVDAYYQEIVKG--LIIVAAVVAD 332

Query: 305 LNRLERREKR 314
           + R ++R KR
Sbjct: 333 VYRQKKRAKR 342