Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 4e-26
 Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 9/263 (3%)

Query: 46  AVPIALATIAQMLVMAVNDLDLSMGAFVSFVACVTATFLRDA-----PAIGILILAGAVA 100
           A PI + ++A   V+    +DLS+G+ V+ +  V A  L          + +L+L G + 
Sbjct: 57  AAPILIVSVAMTFVIITGGIDLSVGSMVALINAVGAILLAAGYPWPLVVVAMLVLGGGLG 116

Query: 101 AYAAIGVVIHLRNLPSIVVTLGMSFVWGGLAVLLLPAPGGQAPDWVRWLMTVKPPLAPMA 160
                G  I  + +P+ +VTL    +  G+A+ +        PD   +    +     M 
Sbjct: 117 LVQ--GWFIAYQGIPAFIVTLAGLSILRGVALYITQGYSVPIPDAPGFFYLGRGDFLGMP 174

Query: 161 IVA--SIIIAVIAHFIVKRSSLGVLIRGVGGNQRSVERAGWSIVAARATAYALAGLFAVL 218
           + A   +++ VIA+ ++  +  G  +  VG N  +  R G       A+ Y  AG+ + +
Sbjct: 175 VPALIGVVVTVIAYIVLSSTRYGRRVVAVGSNPEAARRVGMPAKWILASVYLAAGVASAI 234

Query: 219 AGIALVGLTTSADANIALRYTLLSIAGVILGGGEFTGGRVSPIGAVIGALTLTLASSFLS 278
           AG+ +     S  +N A+ + L  +A V+LGG    GGR + +G V+G +T+ +  + L 
Sbjct: 235 AGLMIAARLGSGSSNAAVGFELQVVAAVVLGGTSLMGGRGTILGTVLGTMTIAVIGNGLI 294

Query: 279 FLRISPDWQIGAQGAILIIVLAL 301
            + ISP +     GAI++  + L
Sbjct: 295 LMHISPFFTQIVTGAIILAAIWL 317