Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  102 bits (255), Expect = 9e-27
 Identities = 97/321 (30%), Positives = 148/321 (46%), Gaps = 27/321 (8%)

Query: 11  PW----VWSWLAAFIVWFLTI---MVTGGAGTLGLSQAALTFAAFSVIVGIGQMFVITLG 63
           PW     W  L    ++F T     +TGG  +L L Q  +       ++ IGQ  +I   
Sbjct: 10  PWGALGPWLALLGACIFFATQSDRFLTGGNLSLILQQVMVVG-----VIAIGQTLIILTA 64

Query: 64  PGNIDLSVPATMTLAGTVALKLMNVENGMVLPGLLLAVFIGLGV----GLCNYTLIKALR 119
              IDLS    M L G +  K    E G+  P   +A+  G+GV    GL N  L+  ++
Sbjct: 65  --GIDLSCGMVMALGGIIMSKFAT-ELGLPAP---VAILCGIGVTTLFGLLNGLLVTRIK 118

Query: 120 IPPIIATL-SMSFVVQSGAIWTNRGLRIKPPSVLAEFTTTNTLGVPNVAIVAVLISVL-- 176
           +PP I TL +++       ++++       P  L    TT ++G   VA  AVL+ VL  
Sbjct: 119 LPPFIVTLGTLNIAFAITQLYSSSQTITDLPGGLTGLGTTFSIGNAEVAWGAVLMLVLYG 178

Query: 177 -AWILLEKTIYGRWISAIGQSMPAARMAGIPVDGTRFVTYLFCAVLASISGYLLACFSGG 235
            AW +L +T  GR I A+G +  A R+ GIP        Y+   VL  I+  L    +G 
Sbjct: 179 LAWFVLRETAAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTGV 238

Query: 236 AALNMGAEYLLMSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGLGAGIRLI 295
              N G    L +I  VV+GGT++ GG   V G     L + +  + L   G+ +  +++
Sbjct: 239 GDPNAGQTENLDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVL 298

Query: 296 MTG-LIIISVIMLAGGRRGMR 315
           +TG L+I++V      RRG R
Sbjct: 299 VTGVLVILAVTADQLSRRGAR 319