Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 341 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  113 bits (282), Expect = 7e-30
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 22/294 (7%)

Query: 35  TLGLSQAALTFAAFSVIVGIGQMFVITLGPGNIDLSVPATMTLAGTVALKLMNVENGM-- 92
           T+  +   LT  AF  I+ +G  FVI    G IDLSV +   L     +  +N       
Sbjct: 54  TVDNAMNVLTRTAFIGIIAVGMCFVII--SGGIDLSVGSMAALIAGSVIMFINWAGPASG 111

Query: 93  -----VLPGLLLAVFIGLGVGLCNYTLIKALRIPPIIATLS--------MSFVVQSGAIW 139
                V+ G +LAV +G   GL +  LI   RI P I TL         +++    GA+ 
Sbjct: 112 SPLMAVVMGAVLAVVLGALFGLAHGLLITKGRIEPFIVTLGTLGIFRAYLTYFADGGALT 171

Query: 140 TNRGLRIKPPSVLAEFTTTNTLGVPNVAIVAVLISVLAWILLEKTIYGRWISAIGQSMPA 199
            +  L      + A     +  G+P    V V+++++  ++L +T YGR++ AIG +   
Sbjct: 172 LDNDLS----DLYAPVYYASLAGIPVPVWVFVIVAIIGGVILNRTAYGRYVQAIGSNEQV 227

Query: 200 ARMAGIPVDGTRFVTYLFCAVLASISGYLLACFSGGAALNMGAEYLLMSIAVVVIGGTAV 259
           AR A + VD  + +TY+   V   I+  L     G A+   G  + L +IA V++GGTA+
Sbjct: 228 ARYAAVDVDRVKILTYVLLGVCVGIATLLYVPRLGSASPTTGLLWELEAIAAVIVGGTAL 287

Query: 260 AGGDSNVPGIWGASLFMFLVVSMLN-TYGLGAGIRLIMTGLIIISVIMLAGGRR 312
            GG  ++ G    ++ + ++ ++LN T  +   +   + G +II V  L  GRR
Sbjct: 288 KGGAGSITGTVVGAILLSVISNILNLTSIISVYLNAAVQGFVIIIVAFLQRGRR 341