Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  112 bits (280), Expect = 1e-29
 Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 13/311 (4%)

Query: 6   RQFGKPWVW---SWLAAFIVWFLTIMVTGGAGTLGLSQAALTFAAFSVIVGIGQMFVITL 62
           R F K W+    S +A  ++  +   ++    T+      L   + + I+ +G   VI  
Sbjct: 10  RYFTKAWLMEQKSLIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILT 69

Query: 63  GPGNIDLSVPATMTLAGTVALKLMNVE-NGMVLPGLLLAVFIGLGVGLCNYTLIKALRIP 121
               IDLSV + + L G +A  ++ +E N +V     LA   G  +G     ++   R+ 
Sbjct: 70  S--GIDLSVGSLLALTGAIAASIVGIEVNALVAVAAALAA--GAAIGAVTGVIVAKGRVQ 125

Query: 122 PIIATLSMSFVVQSGAIWTNRGLRIKP-----PSVLAEFTTTNTLGVPNVAIVAVLISVL 176
             IATL M  +++   +    G  +         +   F     LGVP    +  ++ + 
Sbjct: 126 AFIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFLA 185

Query: 177 AWILLEKTIYGRWISAIGQSMPAARMAGIPVDGTRFVTYLFCAVLASISGYLLACFSGGA 236
           AW +L  T  GR+I A+G +  A R++GI V+  + + Y  C +LAS++G +       A
Sbjct: 186 AWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLSSA 245

Query: 237 ALNMGAEYLLMSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYGLGAGIRLIM 296
               G  Y L +IA VV+GGT++AGG   + G    +L +  + + LN  G+ +  ++I+
Sbjct: 246 QPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIV 305

Query: 297 TGLIIISVIML 307
             ++I+  +++
Sbjct: 306 KAVVILLAVLV 316