Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  117 bits (293), Expect = 4e-31
 Identities = 84/260 (32%), Positives = 138/260 (53%), Gaps = 7/260 (2%)

Query: 51  IVGIGQMFVITLGPGNIDLSVPATMTLAGTVALKLMNVENGMVLPGLLL--AVFIGLGVG 108
           I+ +G  FVI  G   IDLSV A M L GT++  LM V  G+  P + L   +FIGLG+G
Sbjct: 65  ILAVGMTFVILTG--GIDLSVGAVMALVGTLSAGLM-VNTGLS-PAIALPAGLFIGLGIG 120

Query: 109 LCNYTLIKALRIPPIIATLSMSFVVQSGAIWTNRGLRIKP-PSVLAEFTTTNTLGVPNVA 167
           + N  L+   R+P II TL+   + +   +  + G  +   PS ++ F       VP   
Sbjct: 121 IFNGALVAWGRMPAIIVTLATMGMARGLGLIYSGGYPVSGIPSWISWFGVGRVGIVPVPV 180

Query: 168 IVAVLISVLAWILLEKTIYGRWISAIGQSMPAARMAGIPVDGTRFVTYLFCAVLASISGY 227
           I+ V+I  +AW+LL++T +GR + A+G +  AAR++G+     +   Y    V A+ +  
Sbjct: 181 IIMVVIYAVAWVLLQRTAFGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAAL 240

Query: 228 LLACFSGGAALNMGAEYLLMSIAVVVIGGTAVAGGDSNVPGIWGASLFMFLVVSMLNTYG 287
           +L         N G  + L +IA VV+GGTA+AGG   + G    ++ + ++ + LN  G
Sbjct: 241 ILTGRLMSGQPNAGVGFELDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMG 300

Query: 288 LGAGIRLIMTGLIIISVIML 307
           +   ++ ++ G II+  I +
Sbjct: 301 INPYLQDVIKGGIILLAIYI 320