Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

 Score = 98.6 bits (244), Expect = 6e-25
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 28/285 (9%)

Query: 143 SGSATDAVAATQAEQIASRFAGDEEVINSIKITSSQ--QVQLNVRFVEINRDVGKELGTQ 200
           +G+   A  ++    + +R A  +E+  +IK   +   QVQ+  R +E+      +LG Q
Sbjct: 402 AGTRITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQ 461

Query: 201 ISAAYAWSNGSVEFNSSPRATSNTPA--GSLIGSLIGEG------YS-----VDVAIDAL 247
                 W  G +  NSS    +N     G+L G   G G      YS     + VA+ AL
Sbjct: 462 ------WYLGRLAGNSSSTTVANASGSQGALGGGGAGLGATDSLFYSFVSSNLQVALHAL 515

Query: 248 EDRGMARRLAEPNLIARSGETSSFLAGGEFPIP-----ISEQDGTIT-VSYKKFGVGLDF 301
           E  G  + L+ P+L+  + + +    G   PI        + D T++ V Y + GV LD 
Sbjct: 516 ETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPINQTTVNTGDADTTLSSVEYVQTGVILDV 575

Query: 302 TPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTSVDLKSGQSFMIAGLL 361
            P +   GL+ +DI+ +VS  +N ++     +  P  S R   T V ++SGQ+ ++ GL+
Sbjct: 576 VPRINPGGLVYMDIQQQVSDAENQSTNSDTPVN-PRISTRSVSTQVAVQSGQTVLLGGLI 634

Query: 362 QSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLV 406
           + +N      VP LG++P L  LF S +  +  T+L++++TP ++
Sbjct: 635 KQDNQESVSAVPYLGKIPGLRWLFGSTSKSKDRTELIVLITPKVI 679