Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 863 a.a., General secretion pathway protein D from Variovorax sp. SCN45

 Score = 82.0 bits (201), Expect = 7e-20
 Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 29/254 (11%)

Query: 179 QVQLNVRFVEINRDVGKELGTQISAA-------YAWSN-GSVEFNSSPRATSNT-PAGSL 229
           QV +    VE+      ELG Q  A         A +N G    N + R T    P G  
Sbjct: 426 QVLVESLIVEVTERDASELGIQWMAGGGNGRGVRAGTNFGGATLNPNARNTIEAMPRGLN 485

Query: 230 IGSL--------IGEGYSVDVAIDALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPI 281
           IG +        +GE  ++ +   AL+ +  A  L+ PN++    E +S + G   P   
Sbjct: 486 IGIVDGTVNLPGVGEILNLKMLARALQAKDGANILSTPNILTLDNEAASIMVGKTVPFVS 545

Query: 282 --------SEQDGTITVSYKKFGVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGNI 333
                   S  +   T+  +  G+ L+  P +   G + LDI  EVS ID  AS   G +
Sbjct: 546 GQYITNGNSSTNPFQTIQREDIGLKLNIRPQISEGGTVKLDIYQEVSTIDTQASDISGIV 605

Query: 334 AIPGFSVRRARTSVDLKSGQSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRR 393
                + R   TS+ +  GQ  ++ GL++      T+ VPGLG LP++G LF     QR 
Sbjct: 606 T----NKRALDTSILVDDGQIMVLGGLMEDSVANGTEAVPGLGALPVVGNLFRYDKRQRV 661

Query: 394 ETDLVIIVTPHLVK 407
           +T+L++ + P++++
Sbjct: 662 KTNLMVFLRPYVIR 675