Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 456 a.a., type II and III secretion system protein family protein from Variovorax sp. OAS795

 Score =  191 bits (485), Expect = 4e-53
 Identities = 117/285 (41%), Positives = 155/285 (54%), Gaps = 17/285 (5%)

Query: 142 LSGSATDAVAATQAEQIASRFAGDEEVI--NSIKITSSQQVQLNVRFVEINRDVGKELGT 199
           L GS     A  +A   A    G++  +   S+    S  VQ+ V+ VE NR V K+ G 
Sbjct: 132 LGGSLGSMEAHQEARDNAMSAGGEKSALVDRSVVNVRSSTVQVEVKIVEFNRSVLKQAGL 191

Query: 200 QISAAYAWSNG---SVEFNSSPRATS-----------NTPAGSLIGSLIGEGYS-VDVAI 244
            I +  A SNG    V   SS R  S           N P       L   G + + + +
Sbjct: 192 NIFSTRANSNGFSFGVFSPSSLRTASFGDRGTTGTEQNNPLAQAFSLLFNFGKAGIALNV 251

Query: 245 DALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPISEQDGTITVSYKKFGVGLDFTPT 304
             LE  GMAR LAEP L+A SG+++SFLAGGE P+P  +  GT ++ YK FG+GL  TPT
Sbjct: 252 GFLEGNGMARVLAEPTLVALSGQSASFLAGGELPVPAPQGLGTTSIEYKPFGIGLTVTPT 311

Query: 305 VLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTSVDLKSGQSFMIAGLLQSE 364
           VLS+  I L + PE S +D T S  +G +A+P  S RRA T+V+L  G+SF+I GL+   
Sbjct: 312 VLSNDRIVLKVAPEASDLDYTNSLSIGGVAVPAISTRRADTTVELGDGESFIIGGLVSRT 371

Query: 365 NNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLVKPI 409
                 +VP LG +P+LG  F    YQ  E +LVI+VTPHLVKPI
Sbjct: 372 TTSNADKVPLLGDIPVLGTFFKQTKYQMSEKELVILVTPHLVKPI 416