Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 511 a.a., pilus assembly transmembrane protein from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 3e-51
 Identities = 142/485 (29%), Positives = 224/485 (46%), Gaps = 55/485 (11%)

Query: 5   RGSLFAFFCFVVALC-TGIGVSPPASANGDSV----EISSNFSRSIKVAKGKTVTIRAVQ 59
           R SL A   F +      +   P A A   SV    +      ++I +   K V +    
Sbjct: 9   RASLAAGLSFCLTFSGMALPTLPAAEAASSSVVRIVDSGPGARKTINLGLNKAVVVDLPS 68

Query: 60  RFDEIVIGDPEIATVTPLTDRSFYILGNELGSTSVTIFDAEKNPVGIIDIEVTLDTKLLS 119
              +I++ DP +A     T R  Y+ G  +G T++ +F      +  +++ V  D   L 
Sbjct: 69  DAHDILVADPSLADAITRTSRRIYLFGKSVGQTNIFVFGPGGEEIVSLEVAVERDVAGLE 128

Query: 120 STIRQSVPGSSVKVTSANGRIVLSGSATDAVAATQAEQIASRFA---------------- 163
           + +R+ +P + + V   +  +VL+G+    + +T+A  +A  F                 
Sbjct: 129 ANLRRFIPDADINVEIISDNVVLTGTVRTPLDSTRAVDLARAFLKGGEATTRNITAQGNN 188

Query: 164 GD----------EEVINSIKITSSQQVQLNVRFVEINRDVGKELGTQISAAYAWSNGSVE 213
           GD           +++N + I    QV L V   E++R V K+LG   +   +     + 
Sbjct: 189 GDADIFAEDRQNSQIVNLLTIEGDDQVTLKVTVAEVSRQVLKQLG--FNGRVSDGESGIS 246

Query: 214 FNSSPRATSNTPAGS--LIGSLIGEGYSVDVAIDALEDRGMARRLAEPNLIARSGETSSF 271
           F +          G+  LI   IG   ++   I+A+E  G+ R LAEP+L A SG+ + F
Sbjct: 247 FRNPANLGDAIAVGTNALIKGSIGPT-TISSYINAMEQAGVMRTLAEPSLTAISGQEAKF 305

Query: 272 LAGGEF------PIPISEQDGTITVSYK----KFGVGLDFTPTVLSDGLIALDIEPEVSA 321
             GGEF       +   ++ G  TV  +    ++G+ L+F P VL  G I+L IE +VS 
Sbjct: 306 YVGGEFRLAGVQEVSTDDETGQTTVEREVNDVEYGIRLNFKPVVLGPGRISLQIETDVSE 365

Query: 322 IDNTASYRVGN--IAIPGFSV-----RRARTSVDLKSGQSFMIAGLLQSENNLITQRVPG 374
                S   GN   AIPG +      R A TSV+L SG S +IAGL+Q         +PG
Sbjct: 366 PTYEGSVVTGNSMTAIPGNTFLGIRRREASTSVELPSGGSIVIAGLVQDNIRQAMSGLPG 425

Query: 375 LGQLPILGALFSSKAYQRRETDLVIIVTPHLVKPIDPLKKVASPSDRTKRPTEAE-FFLG 433
             ++PILG LF SK +QR ET+LVII TP+LV+P+     ++ P D      + E FFLG
Sbjct: 426 ASKIPILGTLFRSKDFQRSETELVIIATPYLVRPV-ARSAISRPDDNFNPANDLESFFLG 484

Query: 434 NIDEV 438
            ++ +
Sbjct: 485 RVNRI 489