Pairwise Alignments

Query, 466 a.a., PilQ2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 402 a.a., DNA uptake porin HofQ from Escherichia coli ECRC62

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 10/234 (4%)

Query: 179 QVQLNVRFVEINRDVGKELG---TQISAAYAWSNGSVEFNSSPR--ATSNTPAGSLIGSL 233
           QV+L+   V IN    +ELG   T   A +A   G V    S    AT+ T  G  IG +
Sbjct: 170 QVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRI 229

Query: 234 IGEGYSVDVAIDALEDRGMARRLAEPNLIARSGETSSFLAGGEFPIPISE-QDGTITVSY 292
              G  +D+ + ALE +     +A P L+A   + +S   G E P  +S  + G  +V +
Sbjct: 230 --NGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEF 287

Query: 293 KKFGVGLDFTPTVLSDGLIALDIEPEVSAIDNTASYRVGNIAIPGFSVRRARTSVDLKSG 352
           K+  +G++ TPTVL  G I L +    +          G +       +   T V++KSG
Sbjct: 288 KEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL--AIDKQEIETQVEVKSG 345

Query: 353 QSFMIAGLLQSENNLITQRVPGLGQLPILGALFSSKAYQRRETDLVIIVTPHLV 406
           ++  + G+   +N      VP LG +P  G LF     +    +LV+ +TP LV
Sbjct: 346 ETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLV 399